My principle interest in Native American History is the Cherokee Nation. This is mainly due to the proximity of where I live to their homeland.  Following are some good links that I found when helping my daughter with a paper she had to do for school.
The Cherokee Nation
History of the Cherokee
The Cherokee Nation
The Cherokee Trail of Tears
Cherokee Resources Including Genealogy Resources
A Guide to Cherokee Confederate - Military Units, 1861 - 1865
Thomas's Legion
The Creeks
Indians of Georgia
The Creek War

The Mississippian and Late Prehistoric Period
Moundville Archaeological Park
American Indians - A Select Catalog of NARA Microfilm Publications
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